Commit Graph

151 Commits

Author SHA1 Message Date
Dominik Gleich
68a75eeca2 Add database master test
Summary: Seperate rpc server names

Reviewers: florijan, teon.banek

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1118
2018-01-19 14:52:05 +01:00
Dominik Gleich
07d262cd1e Add virtual destructors
Summary:
Virtual destructors were missing in classes/structs which can
be inherited.
A missing virtual destructor gives undefined behaviour when
deleting derived class using base type.

Reviewers: teon.banek

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1117
2018-01-19 10:40:09 +01:00
Teon Banek
93de41e717 Throw RecordDeletedError if updating a deleted record
Summary:
Previously, we would have a `DCHECK` which crashes the application. This
was evident when testing a queries, such as:

    MATCH (n) DELETE n SET n.prop = 42

Since the argument to update clauses is evaluated during execution, it
makes it very difficult to prevent such errors during semantic analysis.
For example:

    MATCH (n)--(m) WITH collect(n) as ns, m
    DETACH DELETE ns[m.prop] SET head(ns).prop = 42

Test query updates on deleted graph elements

Reviewers: florijan, dgleich

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1114
2018-01-17 14:30:57 +01:00
florijan
813d37e939 Migrate db::types to storage::
Reviewers: teon.banek, dgleich

Reviewed By: teon.banek, dgleich

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1110
2018-01-17 10:35:12 +01:00
Dominik Gleich
5418dfb19e Rename NetworkEndpoint
Summary:
Rename redunant port str

Add endpoint << operator

Migrate everything to endpoint

Reviewers: mferencevic, florijan

Reviewed By: mferencevic

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1100
2018-01-15 15:47:37 +01:00
florijan
6fc6a27288 Refactor GraphDb
Summary:
GraphDb is refactored to become an API exposing different parts
necessary for the database to function. These different parts can have
different implementations in SingleNode or distributed Master/Server
GraphDb implementations.

Interally GraphDb is implemented using two class heirarchies. One
contains all the members and correct wiring for each situation. The
other takes care of initialization and shutdown. This architecture is
practical because it can guarantee that the initialization of the
object structure is complete, before initializing state.

Reviewers: buda, mislav.bradac, dgleich, teon.banek

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1093
2018-01-12 16:47:24 +01:00
Dominik Gleich
007a7f1a6d Change network design from Start/Shutdown to constructor/destructor
Summary:
Make ServerT start on constructor

Remove shutdown from MasterCoordinator

Distributed system remove Shutdown

Rcp server start and shutdown removed

Reviewers: florijan, mferencevic

Reviewed By: mferencevic

Subscribers: mferencevic, pullbot

Differential Revision: https://phabricator.memgraph.io/D1097
2018-01-10 14:58:57 +01:00
florijan
3cf81380b8 Implement vertex/edge serialization
Summary:
Serialization of vertices and edges for distributed. Based on Boost
serialization. Threrefore moved TypedValue serialization from AST to
utils.

Reviewers: buda, dgleich, teon.banek

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1088
2018-01-10 13:32:18 +01:00
florijan
4a0345e1c5 Prepare counter for distributed
Reviewers: dgleich, teon.banek

Reviewed By: teon.banek

Differential Revision: https://phabricator.memgraph.io/D1090
2018-01-10 13:28:41 +01:00
florijan
99000c6ec1 Remove PropertyValueStore templatization
Summary:
A PropertyValueStore is not a generic data structure, but only ever used
to store properties in a Vertex/Edge. It has behaviours specific to it.
So, the templatization was not necessary.

Reviewers: buda

Reviewed By: buda

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1089
2018-01-02 16:18:55 +01:00
Dominik Gleich
503381549e Change gid bit size
Summary:
Change gid methods

Rename GidGenerator and add tests

Fix tools broken by gid changes

Reviewers: dgleich, buda

Reviewed By: buda

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1044
2017-12-28 11:04:52 +01:00
Mislav Bradac
d3623585e7 Migrate cereal to boost_serialization
Reviewers: teon.banek

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1077
2017-12-27 13:44:46 +01:00
Dominik Gleich
b094e7473b Add virtual destructor
Summary:
Not having a virtual destructor caused tests
to fail (cypher_main_visitor, interpreter) sporadically
since unfreed memory was re-used incorrectly.
Also Valgrind complained constantly.

Reviewers: florijan, teon.banek

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1081
2017-12-22 15:02:57 +01:00
Dominik Gleich
1556d78d15 Update snapshot format
Summary:
Set vertex/edge generator id from recovery

Add tests

Reviewers: florijan

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1061
2017-12-20 16:57:42 +01:00
florijan
3ae45e0d19 Add master/worker flags, main functions and coordination
Reviewers: dgleich, mislav.bradac, buda

Reviewed By: mislav.bradac

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1060
2017-12-19 16:05:57 +01:00
florijan
37722e54b3 Add RPC to concurrent ID mapper
Summary:
The distributed ID mapper is not yet utilised in GraphDb as those
changes are in D1060. Depending on landing order it will be added.

Reviewers: dgleich, mislav.bradac

Reviewed By: dgleich

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1064
2017-12-19 09:11:16 +01:00
florijan
f5c0455af4 Prepare record accessor for distributed
Summary:
What's done:
- `RecordAccessor` can represent remote data
- `GraphDbAccessor` manages remote data
- Cleanup: different `EdgeAccessor lazyness (@dgleich: take a look), unused methods, documentation...
- `TODO` placeholders for remote implementation

What's not done:
- RPC and data transfer
- how exactly remote errors are handled
- not sure if any MVCC Record info for remote data should be tracked
- WAL and RPC Deltas properly handled (Gleich working on extracting `Wal::Op`)

This implementation should not break single-node execution, and should provide good abstractions and placeholders for distributed. Once that's satisfied, it should land.

Reviewers: dgleich, buda, mislav.bradac

Reviewed By: dgleich

Subscribers: dgleich, pullbot

Differential Revision: https://phabricator.memgraph.io/D1030
2017-12-08 14:12:18 +01:00
Dominik Gleich
03db948d7e Refactor operations into StateDeltas
Summary: Operations are moved and renamed from WAL to a separate file in preparation for HA and distributed storage.

Reviewers: florijan, mtomic, mislav.bradac

Reviewed By: florijan

Subscribers: mislav.bradac, pullbot

Differential Revision: https://phabricator.memgraph.io/D1034
2017-12-07 14:23:41 +01:00
Dominik Gleich
3ddbcad0d9 Refactor global ids and prepare for distributed
Summary:
Change ids to global ids

Fix tests

Reviewers: florijan, buda

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1019
2017-12-05 13:05:55 +01:00
florijan
d1dbf22cd1 Prepare ConcurrentIdMapper for distributed
Reviewers: dgleich

Reviewed By: dgleich

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1017
2017-12-04 14:06:05 +01:00
florijan
ce3638b25e Prepare transactional engine for distributed
Summary:
The current idea is that the same MG binary can be used for single-node,
distributed master and distributed worker. The transactional engine in
the single-node and distributed master is the same: it determines the
transactional time and exposes all the "global" functionalities. In the
distributed worker the "global" functions must contact the master.

Reviewers: dgleich, mislav.bradac, buda

Reviewed By: dgleich

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1013
2017-12-01 09:17:44 +01:00
florijan
2fbe967465 Remove UniqueObjectStore
Summary: Because it will never be used, we already have replacements for it.

Reviewers: buda

Reviewed By: buda

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1016
2017-11-30 13:04:37 +01:00
Dominik Gleich
9c24faa4d6 Expose faster edge_accessor constructor
Summary:
Fix nullptr exceptions

Inline edge_type and from/to in edge accessor

Reviewers: florijan, buda

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D1010
2017-11-29 12:40:11 +01:00
florijan
3bd5a882cf Remove Update and Reconstruct from GraphDbAccessor
Summary: Code simplification made possible by making `locks_` `mutable` in `tx::Transaction`.

Reviewers: dgleich, buda

Reviewed By: buda

Differential Revision: https://phabricator.memgraph.io/D1015
2017-11-29 10:02:01 +01:00
Dominik Gleich
67538aceeb Migrate labels/properties/edgetypes to ids
Summary:
In preparation for distributed storage we need to have labels/properties/edgetypes uniquely identifiable by their ids, which will be global in near future.
The old design has to be abandoned because it's not possible to keep track of global labels/properties/edgetypes while they are local pointers.

Reviewers: mislav.bradac, florijan

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D993
2017-11-23 17:12:37 +01:00
florijan
463e86653d Vertex and Edge distributed storage support
Summary: Vertex and Edge now use Address for storing connections to other Edges and Vertices, to support distributed storage.

Reviewers: mislav.bradac, dgleich, buda

Reviewed By: mislav.bradac, dgleich

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D977
2017-11-14 15:18:06 +01:00
florijan
1e0ac8ab8f Write-ahead log
Summary:
My dear fellow Memgraphians. It's friday afternoon, and I am as ready to pop as WAL is to get reviewed...

What's done:
- Vertices and Edges have global IDs, stored in `VersionList`. Main storage is now a concurrent map ID->vlist_ptr.
- WriteAheadLog class added. It's based around buffering WAL::Op objects (elementraly DB changes) and periodically serializing and flusing them to disk.
- Snapshot recovery refactored, WAL recovery added. Snapshot format changed again to include necessary info.
- Durability testing completely reworked.

What's not done (and should be when we decide how):
- Old WAL file purging.
- Config refactor (naming and organization). Will do when we discuss what we want.
- Changelog and new feature documentation (both depending on the point above).
- Better error handling and recovery feedback. Currently it's all returning bools, which is not fine-grained enough (neither for errors nor partial successes, also EOF is reported as a failure at the moment).
- Moving the implementation of WAL stuff to .cpp where possible.
- Not sure if there are transactions being created outside of `GraphDbAccessor` and it's `BuildIndex`. Need to look into.
- True write-ahead logic (flag controlled): not committing a DB transaction if the WAL has not flushed it's data. We can discuss the gain/effort ratio for this feature.

Reviewers: buda, mislav.bradac, teon.banek, dgleich

Reviewed By: dgleich

Subscribers: mtomic, pullbot

Differential Revision: https://phabricator.memgraph.io/D958
2017-11-13 09:51:39 +01:00
Dominik Gleich
ebc7b2b1b9 Const map/set iteration.
Summary: In the current state, it was not possible to iterate, or even access a const map, or const set structure because of an incorrect implementation of "ConstAccessors".

Reviewers: mislav.bradac, teon.banek, buda

Reviewed By: teon.banek, buda

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D902
2017-10-12 16:35:39 +02:00
Dominik Gleich
fcecb14545 Replace debug_assert, permanent_assert with DCHECK/CHECK
Summary:
Phase 2.

Phase 3.

Phase 4.

Phase 5.

Complete refactor.

Reviewers: florijan, mislav.bradac

Reviewed By: mislav.bradac

Subscribers: mislav.bradac, pullbot

Differential Revision: https://phabricator.memgraph.io/D895
2017-10-11 14:43:32 +02:00
Mislav Bradac
e11216f058 Remove malloc_trim
Reviewers: mferencevic

Reviewed By: mferencevic

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D876
2017-10-06 19:13:01 +02:00
Mislav Bradac
11b2b83c96 Make gc more aggressive and optimise is_not_visible function
Reviewers: florijan, mferencevic

Reviewed By: florijan

Subscribers: buda, pullbot

Differential Revision: https://phabricator.memgraph.io/D849
2017-10-06 10:07:55 +02:00
Mislav Bradac
7dedb88449 Minor cleanup
Reviewers: florijan

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D840
2017-09-27 17:25:00 +02:00
florijan
03c78c1277 BFS syntax changes
Summary:
- The new BFS syntax implemented as proposed.
- AST BreadthFirstAtom now uses EdgeAtom members: has_range_{true}, upper_bound_, lower_bound_
- Edges data structure now handles all the edge filtering (single or multiple edges), to ease planning. Additional edge filtering (additional Filter op in the plan) is removed. AST EdgeTypeTest is no longer used and is removed.

Current state is stable but there are things left to do:
- BFS property filtering.
- BFS lower_bound_ support.
- Support for lambdas in variable length expansion. This includes obligatory (even if not user_defined) inner_node and inner_edge symbols for easier handling.
- Code-sharing between BFS and variable length expansions.

I'll add asana tasks (and probably start working on them immediately) when/if this lands.

Reviewers: buda, teon.banek, mislav.bradac

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D836
2017-09-27 16:25:19 +02:00
Mislav Bradac
3140f175fc Implement record lock deadlock breaker
Reviewers: florijan, buda

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D823
2017-09-27 16:11:05 +02:00
Mislav Bradac
afff458afa Small cleanup of some mvcc classes
Reviewers: florijan, buda

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D835
2017-09-27 15:16:30 +02:00
florijan
a9381df09e Edges data structure now supports multiple edge filtering (implicit OR)
Summary: - modified all utils/algorithm functions to be inline and in the utils namespace

Reviewers: teon.banek

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D830
2017-09-26 13:46:18 +02:00
Matej Ferencevic
383175d85f Bolt - path enconding and decoding
Summary:
Added path encoding and decoding in our Bolt layer. Returning paths to the Neo client seems to work fine.
Not sure how to test that the decoded works fine (our client?).
Tests are not written, that suite is complicated. Leaving that to mferencevic.
Also reduced DecodedValue a bit with macros. Less code, less error prone.

Reviewers: buda, florijan

Reviewed By: florijan

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D810
2017-09-21 13:55:41 +02:00
florijan
347611edfd Named path support
Reviewers: buda, teon.banek, mislav.bradac

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D794
2017-09-19 09:45:50 +02:00
florijan
36fb7f9554 PropertyValueStore - remove Accept function (never used, never will be)
Reviewers: buda

Reviewed By: buda

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D781
2017-09-13 10:11:55 +02:00
florijan
2c4966edfe Vertex edges data structure introduced
Summary:
- The `Edges` data structure now handles common ops, including providing an iterator over edges whose "other" vertex is know.
- This should improve performance on dense_expand tests in the harness without other side-effects.
- query::plan::Expand operator modified not to check for existing-node stuff since that now gets handled by the `Edges` data structure.
- `Edges::Iterator` implemented only for const iterators since that suffices for now. Can implement non-const if the need arrises.

Reviewers: buda, mislav.bradac, teon.banek

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D763
2017-09-08 13:21:21 +02:00
florijan
2954276ca8 Property storage now supports Map
Summary:
Added:
- map support in PropertyValue
- conversion of map TypedValue to PropertyValue if appropriate flag is set (undocumented because it's private)
- ordering of map PropertyValue in LabelPropertyIndex
- issue raised regarding list and value property modifications in storage (currently unsupported)

Maybe I missed some feature or whatever?

Reviewers: mislav.bradac, buda, teon.banek

Reviewed By: mislav.bradac, buda

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D692
2017-08-24 10:29:49 +02:00
florijan
1d112e1141 GraphDbAccessor - style change
Summary: Not strictly neccessary, but it's been itching me. It took an hour.

Reviewers: buda, mislav.bradac

Reviewed By: mislav.bradac

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D648
2017-08-09 16:09:08 +02:00
florijan
e45ae4c4b6 Query::Plan::ExpandBreadthFirst added
Summary:
Not complete (but review can start):
- implementation should be done
- still need to finish tests
- documentation missing

Reviewers: mislav.bradac, teon.banek, buda

Reviewed By: mislav.bradac

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D616
2017-08-03 16:22:38 +02:00
florijan
57dea09b5b Console and random-graph generation improvements
Summary: Random graph generation is now parallel. Slow, though.

Reviewers: teon.banek, buda, mislav.bradac

Reviewed By: mislav.bradac

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D586
2017-08-02 12:23:51 +02:00
Mislav Bradac
404ffdc4ea Fix bug in lock store
Reviewers: buda, mferencevic

Reviewed By: mferencevic

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D594
2017-07-29 17:48:34 +02:00
florijan
7328f5ec7f Query::Plan::VariableExpand added
Summary:
Variable expansion logical operator added. Some functionalities are missing:
- taking into account optional matching when expanding into existing symbol
- accepting Expression bounds (current implementation takes size_t)

Also, a TODO is added for handling optional matching in the uniqueness operator (with an Asana task)

All this will be done in the following diff, this is already substantial.

Also, please consider if we want to have all those `VLOG`s in the code. Not very pretty. And I think that `VLOG` is not compiled-away in release build, will put an asana task.

Reviewers: teon.banek, mislav.bradac, buda

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D569
2017-07-20 14:26:41 +02:00
florijan
a7d8b7124e GraphDbAccessor - index range API
Summary:
- GraphDbAccessor - index range API added
- index api tests refactored
- skiplist minor cleanup.

Reviewers: teon.banek, buda, mislav.bradac

Reviewed By: teon.banek

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D533
2017-07-19 11:55:40 +02:00
Dominik Gleich
e2f3aba332 Use GLogger instead of broken memgraph Logger.
Summary:
http://rpg.ifi.uzh.ch/docs/glog.html

Second phase before tests complete.

Delete logging test.

Finish relase loging.

Reviewers: mislav.bradac, teon.banek, buda

Reviewed By: teon.banek

Subscribers: buda, pullbot

Differential Revision: https://phabricator.memgraph.io/D500
2017-06-21 15:33:24 +02:00
florijan
afbb940a05 GC bugfixes, MVCC and transaction refactoring
Summary:
- GC changed to evaluate old records w.r.t. the oldest transaction's id AND snapshot, as opposed to only id
- MVCC hints exp+aborted race condition prevented
- minor MVCC refactors and cleanups
- minor Transaction refactors and cleanups

Reviewers: buda, dgleich

Reviewed By: buda, dgleich

Subscribers: dtomicevic, pullbot

Differential Revision: https://phabricator.memgraph.io/D434
2017-06-12 10:46:12 +02:00
Dominik Gleich
aa6601407d 'Memory leak' fix.
Summary: Memgraph seemed like it leaked memory while in fact it was just keeping it close by. By forcing release of free memory on top of heap back to the operating system we are making sure we are not using more memory than we have to in any given moment.

Reviewers: mferencevic, buda

Reviewed By: buda

Subscribers: pullbot

Differential Revision: https://phabricator.memgraph.io/D385
2017-05-19 13:25:51 +02:00